BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005D02SP1|AL425363
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1725 1862 0.0
>3x_Contig1725
Length = 17473
Score = 1862 bits (935), Expect = 0.0
Identities = 955/963 (99%), Gaps = 2/963 (0%)
Strand = Plus / Minus
Query: 1 tacgtacctcatatcttccattcctttcgagtaacaacactcttctaactcttaattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 tacgtacctcatatcttccattcctttcgagtaacaacactcttctaactcttaattcag 1583
Query: 61 tttcaccccccctctcactagatctcttacttacaagatggtgtgttgtgctgtatctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 tttcaccccccctctcactagatctcttacttacaagatggtgtgttgtgctgtatctat 1523
Query: 121 gctgaacagacagataaactgtgtatgggtatggctatttagtcaaaaggaaaaaaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 gctgaacagacagataaactgtgtatgggtatggctatttagtcaaaaggaaaaaaaaca 1463
Query: 181 gtccaaaagagacaagaaaaaaataataaaamatacacttctaatgattatttactcaga 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1462 gtccaaaagagacaagaaaaaaataataaaaaatacacttctaatgattatttactcaga 1403
Query: 241 gctgttaagagaatgagaacatgcttataccagtctgaaatttaaattgaaacaaaaacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 gctgttaagagaatgagaacatgcttataccagtctgaaatttaaattgaaacaaaaacg 1343
Query: 301 gagagatcttcaagtcagtagaatatgtccattatttcgctctttgtcttgttactagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 gagagatcttcaagtcagtagaatatgtccattatttcgctctttgtcttgttactagtt 1283
Query: 361 cctcatttcttcttaccttctaaccatcttgaacatcaaatctaatctggcatggtgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 cctcatttcttcttaccttctaaccatcttgaacatcaaatctaatctggcatggtgtat 1223
Query: 421 tgttttctgatttcatatttytyttgtctcgagaacaatgagatgagctgccgacaaatt 480
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 1222 tgttttctgatttcatattttttttgtctcgagaacaatgagatgagctgccgacaaatt 1163
Query: 481 tggaaaaatgtttcgtggtttgcctattttggaggtctggggttttgggctctcaagatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 tggaaaaatgtttcgtggtttgcctattttggaggtctggggttttgggctctcaagatc 1103
Query: 541 tcattttttggggaccacagaagacatctctaccaacagagaaaaacttaaatmagayag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 1102 tcattttttggggaccacagaagacatctctaccaacagagaaaaacttaaataagatag 1043
Query: 601 tccaaatatccggatatatatytccgtagtggatttgtatttgcatttgtcagttttttt 660
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 tccaaatatccggatatatatttccgtagtggatttgtatttgcatttgtcagttttttt 983
Query: 661 gtacctgtattataaggaaatgacaggcatctcaatgcttcgtatagataaggcaaccat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 gtacctgtattataaggaaatgacaggcatctcaatgcttcgtatagataaggcaaccat 923
Query: 721 ctaatgctcggttatctttcatagcagggacttatatatttaggggggtgtgctgagatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ctaatgctcggttatctttcatagcagggacttatatatttaggggggtgtgctgagatg 863
Query: 781 atctctgaatccaatcttcagttcgacctcttcatcttgaaagctaaatgtatgtccata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 atctctgaatccaatcttcagttcgacctcttcatcttgaaagctaaatgtatgtccata 803
Query: 841 tctttccaacttcatatagtcaaacgagtattaatagattaataatgaaagcccaattgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tctttccaacttcatatagtcaaacgagtattaatagattaataatgaaagcccaattgt 743
Query: 901 tcagcaaaacaccgttattg-aacatcaattcaaaagaagtaaagg-cctcaagtgcttt 958
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 742 tcagcaaaacaccgttattgaaacatcaattcaaaagaagtaaaggccctcaagtgcttt 683
Query: 959 tga 961
|||
Sbjct: 682 tga 680
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8650
Number of Sequences: 1807
Number of extensions: 8650
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)